The detailed information of tRNA gene sequence


Sequence ID>SRA1011022
Genome IDSRR020492.254498
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 146
End posion on genome 72
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
acggaaaaat
tRNA gene sequence 
GCCCCGGTAGCTCAGCTGGATAGAGCATCTGCCTTCTAAGCAGAATGTCACAGGTTCGAG
TCCTGTCCGGGGTACtt
Downstream region at tRNA end position 
cctgtctcgt
Secondary structure (Cloverleaf model)
>SRA1011022	Arg	TCT
                   t      ACtt cctgtctcgt
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     ATGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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