The detailed information of tRNA gene sequence


Sequence ID>SRA1011023
Genome IDSRR020492.254775
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 184
End posion on genome 92
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aattattgtt
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCTGAAGGCGCCCGCCTGCTAAGCGGGTATACGGTTTAGAGCC
GTATCGAGGGTTCGAATCCCTCTCTCTCCACAA
Downstream region at tRNA end position 
ggcttttact
Secondary structure (Cloverleaf model)
>SRA1011023	Ser	GCT
                   t      ACAA ggcttttact
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGGTTTAGAGCCGTATC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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