The detailed information of tRNA gene sequence


Sequence ID>SRA1011030
Genome IDSRR020492.258250
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 224
End posion on genome 148
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttcctactcc
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTTAGAGCAATCGACTCATAATCGATTGGTCCTTGGTTCAAG
TCCAAGTAGGCCCACCA
Downstream region at tRNA end position 
aacttaataa
Secondary structure (Cloverleaf model)
>SRA1011030	Met	CAT
                   c      ACCA aacttaataa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T          T G
                    T     G A A C C     A
      T G A        A      | | | | |     A
    T       C T C G       C T T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    A - T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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