The detailed information of tRNA gene sequence


Sequence ID>SRA1011036
Genome IDSRR020492.261893
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 8
End posion on genome 97
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
nnnttggctc
tRNA gene sequence 
GGAGGGGTGGCCGAGTGGCTTAAGGCGCCTGTCTTGAAAACAGGTATGTCCGTGAGGGCA
TCGCAGGTTCGAATCCTGTCCCCTCCGCCA
Downstream region at tRNA end position 
gatttcctga
Secondary structure (Cloverleaf model)
>SRA1011036	Ser	TGA
                   c      GCCA gatttcctga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        G      + | | | |     G
    G       G C C G       G C A G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TATGTCCGTGAGGGCATC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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