The detailed information of tRNA gene sequence


Sequence ID>SRA1011050
Genome IDSRR020492.267883
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 107
End posion on genome 31
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
accgccgatc
tRNA gene sequence 
CGGGATGTGGCGCAGTCAGGCAGCGCACCTGCTTTGGGAGCAGGGGGTCGGCGGTTCAAA
TCCGCCCATCCCGACCA
Downstream region at tRNA end position 
gtgaatcgtg
Secondary structure (Cloverleaf model)
>SRA1011050	Pro	TGG
                   c      ACCA gtgaatcgtg
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     C C G C C     A
      T G A        G      | | | | |     A
    C       C G C G       G G C G G     C
    A       | | | |                 T T
    G       G C G C
      G C A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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