The detailed information of tRNA gene sequence


Sequence ID>SRA1011051
Genome IDSRR020492.268017
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 181
End posion on genome 89
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgccttcttc
tRNA gene sequence 
GGAGAGATGGCCGAGTTGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATAGGCTTTAACTC
CTATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ctctattttt
Secondary structure (Cloverleaf model)
>SRA1011051	Ser	GCT
                   c      GCCA ctctattttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G C C G       G A G G G     C
  G           | | |                 T T
  C         A G G C
    T G A          G     TATAGGCTTTAACTCCTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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