The detailed information of tRNA gene sequence


Sequence ID>SRA1011053
Genome IDSRR020492.268240
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 104
End posion on genome 179
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
caccgaaatt
tRNA gene sequence 
GCGCCCGTAGCTCAATTGGTAGAGCAGTGGCCTCTTAAGCCATTGGTTGAAGGTTCGAGT
CCTTCTGGGCGTACTA
Downstream region at tRNA end position 
ccatacttct
Secondary structure (Cloverleaf model)
>SRA1011053	Lys	CTT
                   t      ACTA ccatacttct
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G + T          T G
                    T     C T T C C     A
      T A A        A      | | | | |     G
    T       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTT
                    G + T
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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