The detailed information of tRNA gene sequence


Sequence ID>SRA1011058
Genome IDSRR020492.269343
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 113
End posion on genome 40
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tcggctcctc
tRNA gene sequence 
GGGGCTATAGCTCAGTTGGCAGAGCGCTTCCATGGCATGGAAGAGGTCGAGGGTTCAATT
CCCTCTAGCTCCACgt
Downstream region at tRNA end position 
gacgccgcag
Secondary structure (Cloverleaf model)
>SRA1011058	Ala	GGC
                   c      ACgt gacgccgcag
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          T T
                    T     C T C C C     A
      T G A        A      | | | | |     A
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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