The detailed information of tRNA gene sequence


Sequence ID>SRA1011060
Genome IDSRR020492.269499
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 184
End posion on genome 109
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ctaggactgt
tRNA gene sequence 
GCTCACCTAGCTCAGTCGGTAGAGCACTTCCTTGGTAAGGAAGAGGTCGCCGGTTCAAAT
CCGGTGGTGAGCTCCA
Downstream region at tRNA end position 
cttaacatta
Secondary structure (Cloverleaf model)
>SRA1011060	Thr	GGT
                   t      TCCA cttaacatta
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T
                     C - G
                     C - G          T A
                    T     T G G C C     A
      T G A        A      + | | | |     A
    C       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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