The detailed information of tRNA gene sequence


Sequence ID>SRA1011085
Genome IDSRR020492.280148
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 10
End posion on genome 99
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nttctgctgt
tRNA gene sequence 
GGAGAGATGACCGAGTGGCCGAAGGTGCGTGACTGGAAATCACGTGTGCGGGCAACCGTA
CCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
cacatacttc
Secondary structure (Cloverleaf model)
>SRA1011085	Ser	GGA
                   t      GCCA cacatacttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    C       A G G T
      C G A        G     TGTGCGGGCAACCGTACC
                    C - G
                    G - C
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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