The detailed information of tRNA gene sequence


Sequence ID>SRA1011102
Genome IDSRR020492.288013
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 74
End posion on genome 163
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gaataaatca
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTTTAATGCGCTCGCTTGGAAAGCGTGTAAGGGCTAATACCCT
TCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gtagaaattt
Secondary structure (Cloverleaf model)
>SRA1011102	Ser	GGA
                   a      GCCA gtagaaattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G A G G G     C
    G         | | |                 T T
    T       A T G C
      T T A        G     TAAGGGCTAATACCCTTC
                    C - G
                    T   T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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