The detailed information of tRNA gene sequence


Sequence ID>SRA1011104
Genome IDSRR020492.288542
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 97
End posion on genome 173
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
actggacgta
tRNA gene sequence 
GGGCGCTTAGCTCAGCTTGGAAGAGCACCTGGTTTGCAACCAGGTGGCCGGGGGTTCAAA
TCCCCCAGCGTCCACCA
Downstream region at tRNA end position 
ccctcgttcg
Secondary structure (Cloverleaf model)
>SRA1011104	Ala	TGC
                   a      ACCA ccctcgttcg
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     C - G
                     T - A          T A
                    T     C C C C C     A
      C G A        A      | | | | |     A
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G A A        A     TGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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