The detailed information of tRNA gene sequence


Sequence ID>SRA1011106
Genome IDSRR020492.289802
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 162
End posion on genome 76
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position
cttatcggta
tRNA gene sequence
GCCAGGGTCGCATAGCCCGGTATTGCGGTGGCCTCGAAAGCCACTGGGAGCAATCCCTCG
GGGGTTCAAATCCCTCCCCTGGCGCAA
Downstream region at tRNA end position
gtagattatt
Secondary structure (Cloverleaf model)
>SRA1011106	Ser	CGA
                   a      GCAA gtagattatt
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        C      | + | | |     A
    C       T A C G       G G G G G     C
    C         | | |                 T T
    G       T T G C
      G T A        G     TGGGAGCAATCCCTC
                    G - C
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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