The detailed information of tRNA gene sequence


Sequence ID>SRA1011116
Genome IDSRR020492.291523
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 96
End posion on genome 172
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcctctttag
tRNA gene sequence 
TGCGGGGTGGAGCAGTATGGTAGCTCGTCGGGCTCATAACCCGAAGGTCATAGGTTCAAA
TCCTGTCCCCGCTACCA
Downstream region at tRNA end position 
atttagaccc
Secondary structure (Cloverleaf model)
>SRA1011116	Met	CAT
                   g      ACCA atttagaccc
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
      T G A        G      | + | | |     A
    A       C G A G       A T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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