The detailed information of tRNA gene sequence


Sequence ID>SRA1011149
Genome IDSRR020492.307002
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 126
End posion on genome 52
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
catacgtcat
tRNA gene sequence 
GCCAATGTAGCTCAGCCTGGCTAGAGCAGCTGATTTGTAATCAGCAGGTCGCGAGTTCAA
ATCTCGTCATTGGCTtta
Downstream region at tRNA end position 
tctaaattta
Secondary structure (Cloverleaf model)
>SRA1011149	Thr	TGT
                   t      Ttta tctaaattta
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     T - A
                     G - C          T A
                    T     T G C T C     A
    C C G A        A      + | | | |     A
  T         C T C G       G C G A G     C
  G         | | | |                 T T
  G         G A G C
    C T A          A     AGGTC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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