The detailed information of tRNA gene sequence


Sequence ID>SRA1011158
Genome IDSRR020492.308863
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 134
End posion on genome 222
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aagttgtaac
tRNA gene sequence 
GGAGGGATGGGTGAGTGGTTGAAACCGACGGACTTGAAATCCGTTAAGGCTGCAAGGTCT
TCGGGGTTCGAATCCCTCTCCCTCCGCCA
Downstream region at tRNA end position 
gcttttttaa
Secondary structure (Cloverleaf model)
>SRA1011158	Ser	TGA
                   c      GCCA gcttttttaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G        + | | |     G
    G       G T G G       C G G G G     C
    G         | | |                 T T
    T       A A C C
      T G A        G     TAAGGCTGCAAGGTCTT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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