The detailed information of tRNA gene sequence


Sequence ID>SRA1011160
Genome IDSRR020492.309127
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 273
End posion on genome 199
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ntaagtaact
tRNA gene sequence 
GGGGCTGTAGTTCAGTTGGTTAGAACGCCGGCCTGTCAAGCCGGAGGTCGCGAGTTCGAG
TCTCGTCAGTCCCGCtg
Downstream region at tRNA end position 
tagaccccat
Secondary structure (Cloverleaf model)
>SRA1011160	Asp	GTC
                   t      GCtg tagaccccat
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G A G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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