The detailed information of tRNA gene sequence


Sequence ID>SRA1011165
Genome IDSRR020492.310429
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 105
End posion on genome 16
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
acaaaaactt
tRNA gene sequence 
GGTGGGGTGGCAGAGCGGTTGAATGCACTGGTCTTGAAAACCAGCAAGGGTTTACGCCCT
TCGAGAGTTCGAATCTCTCCCCCACCGCCA
Downstream region at tRNA end position 
aaatgtcctg
Secondary structure (Cloverleaf model)
>SRA1011165	Ser	TGA
                   t      GCCA aaatgtcctg
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C T C     A
      C G A        G      | | | | |     G
    G       G A C G       G A G A G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     CAAGGGTTTACGCCCTTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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