The detailed information of tRNA gene sequence


Sequence ID>SRA1011166
Genome IDSRR020492.310465
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 8
End posion on genome 83
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
nnngctttta
tRNA gene sequence 
GGGCGCTTAGCTCAGTTGGTCAGAGCGCCGCCCTTACAAGGCGGGAAGTCATAAGTTCGA
GTCTTATAGCGCCCACtt
Downstream region at tRNA end position 
ctcgaaagcc
Secondary structure (Cloverleaf model)
>SRA1011166	Val	TAC
                   a      ACtt ctcgaaagcc
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A          T G
                    T     T A T T C     A
      T G A        A      | | | | |     G
    T       C T C G       A T A A G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     GAAGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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