The detailed information of tRNA gene sequence


Sequence ID>SRA1011169
Genome IDSRR020492.311585
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 114
End posion on genome 38
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tgctcttttt
tRNA gene sequence 
GGGCGATTAGCTCAGCTGGTTAGAGCGCCGTCCTCACACGGCGGAGGTCACTGGTTCGAA
TCCAGTATCGCCCACCA
Downstream region at tRNA end position 
tttcgcggct
Secondary structure (Cloverleaf model)
>SRA1011169	Val	CAC
                   t      ACCA tttcgcggct
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     T G A C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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