The detailed information of tRNA gene sequence


Sequence ID>SRA1011174
Genome IDSRR020492.312644
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 89
End posion on genome 180
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gagccggtac
tRNA gene sequence 
GGAGGGATCGCATAGTGGTCTAGTGCGGGCGCCTGCTAAGCGCTTATTCTGAGAAATTGG
AATCGTGGGTTCGAATCCCACTCCCTCCGCCA
Downstream region at tRNA end position 
cgccaaaact
Secondary structure (Cloverleaf model)
>SRA1011174	Ser	GCT
                   c      GCCA cgccaaaact
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    T       G T G C
      C T A        G     TATTCTGAGAAATTGGAATC
                    G + T
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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