The detailed information of tRNA gene sequence


Sequence ID>SRA1011175
Genome IDSRR020492.312718
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 180
End posion on genome 254
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aatagtaact
tRNA gene sequence 
GGGGCTGTAGTTCAGTTGGTTAGAACGCCGGCCTGTCAAGCCGGAGGTCGCGAGTTCGAG
TCTCGTCAGTCCCGCag
Downstream region at tRNA end position 
tagaccccgt
Secondary structure (Cloverleaf model)
>SRA1011175	Asp	GTC
                   t      GCag tagaccccgt
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G A G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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