The detailed information of tRNA gene sequence


Sequence ID>SRA1011181
Genome IDSRR020492.314842
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 102
End posion on genome 178
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcctcgctcc
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCGGGTTCGAA
TCCCGCCCCCGCTACCA
Downstream region at tRNA end position 
agcagagggc
Secondary structure (Cloverleaf model)
>SRA1011181	Met	CAT
                   c      ACCA agcagagggc
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    C       C G A G       G C G G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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