The detailed information of tRNA gene sequence


Sequence ID>SRA1011186
Genome IDSRR020492.316365
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 185
End posion on genome 110
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aacaaaatag
tRNA gene sequence 
AGGTGAGTAGTTCAACTGGTAGAGCGCCGGCCTCCAAAGCCGGAAGTTGAGGGTTCGAGT
CCTTCCTCACCTGCTA
Downstream region at tRNA end position 
aagaaaatta
Secondary structure (Cloverleaf model)
>SRA1011186	Trp	CCA
                   g      GCTA aagaaaatta
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C          T G
                    T     C T T C C     A
      C A A        A      | | + | |     G
    T       C T T G       G A G G G     C
    G       | | + |                 T T
    G       G A G C
      T A          G     AAGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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