The detailed information of tRNA gene sequence


Sequence ID>SRA1011208
Genome IDSRR020492.326552
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 186
End posion on genome 110
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ataaatttta
tRNA gene sequence 
GGCGGCGTAGCTCAGTTGGTTAGAGCATCGGAATCATAATCCGGGTGTCCGGGGTTCGAG
TCCCTGCGCCGCCACAA
Downstream region at tRNA end position 
ttatgattat
Secondary structure (Cloverleaf model)
>SRA1011208	Met	CAT
                   a      ACAA ttatgattat
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     G T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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