The detailed information of tRNA gene sequence


Sequence ID>SRA1011215
Genome IDSRR020492.328085
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 175
End posion on genome 89
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccagagcgct
tRNA gene sequence 
GCGGCAGTCGCATAGCCTGGCCATTGCGCTGGATTGCTAATCCAGTGGTATTTTACCTCG
GGAGTTCGAATCTCCCCTGCCGCGCCA
Downstream region at tRNA end position 
cccgcccaag
Secondary structure (Cloverleaf model)
>SRA1011215	Ser	GCT
                   t      GCCA cccgcccaag
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T A
                    T     C C C T C     A
    C C G A        C      | | | | |     G
  T         T A C G       G G G A G     C
  G           | | |                 T T
  G         T T G C
    C C A          G     TGGTATTTTACCTC
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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