The detailed information of tRNA gene sequence


Sequence ID>SRA1011219
Genome IDSRR020492.329451
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 84
End posion on genome 174
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
caaagataca
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGTCGAATGCGGCGGTCTTGAAAACCGTTGATGGTTAATAGCTA
TCCGGGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gacaataatt
Secondary structure (Cloverleaf model)
>SRA1011219	Ser	TGA
                   a      GCCA gacaataatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGATGGTTAATAGCTATCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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