The detailed information of tRNA gene sequence


Sequence ID>SRA1011235
Genome IDSRR020492.335186
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 85
End posion on genome 160
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtcgggaccc
tRNA gene sequence 
AGGGCAGTGGCTCAATTGGTAGAGCACCGGTCTCCAAAACCGGCGGTTGGGGGTTCGAGT
CCCTCCTGCCCTGCAA
Downstream region at tRNA end position 
gaccgatcgc
Secondary structure (Cloverleaf model)
>SRA1011235	Trp	CCA
                   c      GCAA gaccgatcgc
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     CGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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