The detailed information of tRNA gene sequence


Sequence ID>SRA1011240
Genome IDSRR020492.338059
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 10
End posion on genome 99
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
naagaagcac
tRNA gene sequence 
GGAGGAGTGGTCGAGTGGTTGAAGGCGGCGGTCTTGAAAACCGTTGTACCCGAGAGGGTA
CCGTGGGTTCGAATCCCACCTCCTCCGCCA
Downstream region at tRNA end position 
tgctcttaga
Secondary structure (Cloverleaf model)
>SRA1011240	Ser	TGA
                   c      GCCA tgctcttaga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C T G       G T G G G     C
    G         | + |                 T T
    T       A G G C
      T G A        G     TGTACCCGAGAGGGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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