The detailed information of tRNA gene sequence


Sequence ID>SRA1011258
Genome IDSRR020492.343831
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 187
End posion on genome 112
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
atgtatattt
tRNA gene sequence 
GGGCTTGTAGCTCAGGTTGGTTAGAGCGCATCCCTGATAAGGATGAGGTCCGTGGTTCGA
GTCCACGCAGGCCCACtt
Downstream region at tRNA end position 
gaggaaagcc
Secondary structure (Cloverleaf model)
>SRA1011258	Ile	GAT
                   t      ACtt gaggaaagcc
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T G
                    T     G C A C C     A
    T G G A        A      | | | | |     G
  T         C T C G       C G T G G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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