The detailed information of tRNA gene sequence


Sequence ID>SRA1011277
Genome IDSRR020492.350365
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 266
End posion on genome 179
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
nnnnnncttt
tRNA gene sequence 
GCGGGAGTCGCCCAGCCTGGTCAACGGCGTAAGGTTCAGATCCTTATCTCTTAGGAGTTC
GTGGGTTCAAATCCCATCTCCCGCACTA
Downstream region at tRNA end position 
actatagaat
Secondary structure (Cloverleaf model)
>SRA1011277	Leu	CAG
                   t      ACTA actatagaat
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T A C C C     A
    C C G A        C      + | | | |     A
  T         C C C G       G T G G G     C
  G           | | |                 T T
  G         C G G C
    T C A A        G     TCTCTTAGGAGTTC
                    T - A
                    A - T
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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