The detailed information of tRNA gene sequence


Sequence ID>SRA1011279
Genome IDSRR020492.351595
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 172
End posion on genome 246
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aaacaaatcc
tRNA gene sequence 
GGGCGCTTAGCTCAGTTGGTCAGAGCGCTGTCTTCACACGGCAGAGGTCGGCAGTTCGAG
CCTGCCAGTGCCCACtc
Downstream region at tRNA end position 
gtctaaagnn
Secondary structure (Cloverleaf model)
>SRA1011279	Val	CAC
                   c      ACtc gtctaaagnn
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     C - G
                     T - A          C G
                    T     C C G T C     A
      T G A        A      | | | | |     G
    T       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    T + G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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