The detailed information of tRNA gene sequence


Sequence ID>SRA1011280
Genome IDSRR020492.351850
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 85
End posion on genome 169
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
gataattcgt
tRNA gene sequence 
GGGCGAGTGGCGGAATTGGTAGACGCGTTGGTCTTAGGAACCAATAGTGTAAGCTGTGAA
GGTTCGAGTCCTTTCTCGCCTACCA
Downstream region at tRNA end position 
aaaatattat
Secondary structure (Cloverleaf model)
>SRA1011280	Leu	TAG
                   t      ACCA aaaatattat
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C          T G
                    T     T T T C C     A
      T A A        G      + | | | |     G
    T       G G C G       G A A G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TAGTGTAAGCTGT
                    T - A
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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