The detailed information of tRNA gene sequence


Sequence ID>SRA1011300
Genome IDSRR020492.361853
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 55
End posion on genome 143
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agacggttta
tRNA gene sequence 
GCGGGGGTCGCATAGTCTGGCCATTGCGTTGGATTGCTAATCCAATGGGATTTTATCCCA
CGGGGGTTCAAATCCCCCTCCCCGCGCCA
Downstream region at tRNA end position 
tcgtatcctc
Secondary structure (Cloverleaf model)
>SRA1011300	Ser	GCT
                   a      GCCA tcgtatcctc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C C C C C     A
    C T G A        C      | | | | |     A
  T         T A C G       G G G G G     C
  G           | | |                 T T
  G         T T G C
    C C A          G     TGGGATTTTATCCCAC
                    T - A
                    T - A
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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