The detailed information of tRNA gene sequence


Sequence ID>SRA1011311
Genome IDSRR020492.365622
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 74
End posion on genome 149
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
attttttatT
tRNA gene sequence 
GGGCCGGTCGTCTAGACTGGTAGGATACGCCCTTGGCATGGGTGAGATCGAGGGTTCAAA
TCCCTCCCGGTCCATta
Downstream region at tRNA end position 
catattcttt
Secondary structure (Cloverleaf model)
>SRA1011311	Ala	GGC
                   T      ATta catattcttt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      A G A        C      | | | | |     A
    C       T C T G       G A G G G     C
    T       + | | +                 T T
    G       G G A T
      G T A        A     AGATC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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