The detailed information of tRNA gene sequence


Sequence ID>SRA1011312
Genome IDSRR020492.366232
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 269
End posion on genome 180
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttttctttaa
tRNA gene sequence 
GGAGAGATGGCCGAGTGGTTGAAGGCGCGCGCTTGGAAAGTGTGTATACGGGAAACCGTA
TCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
tttttaagat
Secondary structure (Cloverleaf model)
>SRA1011312	Ser	GGA
                   a      GCCA tttttaagat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATACGGGAAACCGTATC
                    C - G
                    G + T
                    C - G
                    G + T
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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