The detailed information of tRNA gene sequence


Sequence ID>SRA1011319
Genome IDSRR020492.370854
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 104
End posion on genome 31
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
agagacataa
tRNA gene sequence
AGGAGAGTGGCGCAGTGGTTTAGCGTGCGTGGCTCATAACCACGAGGTCGGTTGTTCGAT
TCAACCCTCTCCTAtat
Downstream region at tRNA end position
tccccaatat
Secondary structure (Cloverleaf model)
>SRA1011319	Met	CAT
                   a      Atat tccccaatat
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C          T T
                    T     C C A A C     A
      T G A        G      | | | | |     G
    G       C G C G       G G T T G     C
    G       | | | +                 T T
    T       G C G T
      T T A        G     AGGTC
                    C - G
                    G - C
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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