The detailed information of tRNA gene sequence


Sequence ID>SRA1011325
Genome IDSRR020492.372209
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 214
End posion on genome 125
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgatgcgctt
tRNA gene sequence 
GGAGGCGTGGCAGAGTCTGGCTAAATGCACCGGTCTTGAAAACCGGCAAGGGCTTACGTC
CTTCAGAGGTTCGAATCCTCTCGCCTCCGCtt
Downstream region at tRNA end position 
atatcatcta
Secondary structure (Cloverleaf model)
>SRA1011325	Ser	TGA
                   t      GCtt atatcatcta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
    C T G A        G      | | | | |     G
  T         G A C G       A G A G G     C
  G           | | |                 T T
  G         A T G C
    C T A A        A     CAAGGGCTTACGTCCTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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