The detailed information of tRNA gene sequence


Sequence ID>SRA1011328
Genome IDSRR020492.373933
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 230
End posion on genome 141
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
accattttta
tRNA gene sequence 
GGAGAGGTGACAGAGTGGCTTATCGTGCAACATTGGAAATGTTGTGTTGCAGAAATGCAA
CCGCGGGTTCAAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
ttttagcaat
Secondary structure (Cloverleaf model)
>SRA1011328	Ser	GGA
                   a      GCCA ttttagcaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     A
    G       G A C A       G C G G G     C
    G       +   | |                 T T
    C       T C G T
      T T A        G     TGTTGCAGAAATGCAACC
                    C - G
                    A - T
                    A - T
                    C - G
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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