The detailed information of tRNA gene sequence


Sequence ID>SRA1011331
Genome IDSRR020492.374135
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 124
End posion on genome 48
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taaattagat
tRNA gene sequence 
GGCGGGGTAGCTCAGTTGGTTAGAGCACAGGACTCATAAGCCTGGGGTCGGTGGTTCGAA
TCCACTCCCCGCTACCA
Downstream region at tRNA end position 
ataaaatcaa
Secondary structure (Cloverleaf model)
>SRA1011331	Met	CAT
                   t      ACCA ataaaatcaa
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C A C C     A
      T G A        A      + | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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