The detailed information of tRNA gene sequence


Sequence ID>SRA1011347
Genome IDSRR020492.377857
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 78
End posion on genome 167
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctgaaaaatt
tRNA gene sequence 
GGAAGCGTGGGTGAGTGGCTTAAACCAGAAGTTTGCTAAATTTCCGTTGGGGTTTCCCAA
CCAAGAGTTCGAATCTCTTCGCTTCCGCCA
Downstream region at tRNA end position 
ttcttagtaa
Secondary structure (Cloverleaf model)
>SRA1011347	Ser	GCT
                   t      GCCA ttcttagtaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     T T C T C     A
      T G A        G      | | | | |     G
    G       G T G G       A A G A G     C
    G         | | |                 T T
    C       A A C C
      T T A        A     CGTTGGGGTTTCCCAACC
                    G - C
                    A - T
                    A - T
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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