The detailed information of tRNA gene sequence


Sequence ID>SRA1011361
Genome IDSRR020492.382770
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 269
End posion on genome 196
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tactgcaaat
tRNA gene sequence 
GGCTGGGTGGCAGAGTGGTTATGCAGAGGATTGCAAATCCTTGAACGTCGGTTCGATTCC
GGTCCCAGCCTCCA
Downstream region at tRNA end position 
ttatgttgtt
Secondary structure (Cloverleaf model)
>SRA1011361	Cys	GCA
                   t      TCCA ttatgttgtt
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     G - C          T T
                    T     T G G C C     A
        G A        G      + + | | |     G
      T     G A C G       G T C G G     C
      G       | | |                 T T
      G     A T G C
        T T        A     GAAC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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