The detailed information of tRNA gene sequence


Sequence ID>SRA1011377
Genome IDSRR020492.387542
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 279
End posion on genome 203
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
nnnnnnnnnc
tRNA gene sequence 
GGACCGGTAGTCAGTTTGGTTAGAACGCCGCCCTGTCACGGCGGAGGTCGCGAGTTCGAG
TCTCGTCCGGTCCGCCA
Downstream region at tRNA end position 
tatactaaat
Secondary structure (Cloverleaf model)
>SRA1011377	Asp	GTC
                   c      GCCA tatactaaat
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T G C T C     A
      T T G        A      + | | | |     G
    T       A C T G       G C G A G     C
    G           | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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