The detailed information of tRNA gene sequence


Sequence ID>SRA1011391
Genome IDSRR020492.392235
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 195
End posion on genome 119
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccagaaattt
tRNA gene sequence 
GGAGCGGTAGTTCAGTTGGTTAGAACGCCTGCCTGTCACGCAGGAGGTCGCGGGTTCGAC
CCCCGTCCGCTCCGCCA
Downstream region at tRNA end position 
taattggatg
Secondary structure (Cloverleaf model)
>SRA1011391	Asp	GTC
                   t      GCCA taattggatg
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          C C
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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