The detailed information of tRNA gene sequence


Sequence ID>SRA1011400
Genome IDSRR020492.395419
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 57
End posion on genome 132
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tttctgcgtG
tRNA gene sequence 
GGCGGCTTGGCTCAGTGGTAGAGCATCGCCTTCACACGGCGGGGGTCGGTGGTTCGAATC
CACCAGCGCCCACCA
Downstream region at tRNA end position 
gcctgacctc
Secondary structure (Cloverleaf model)
>SRA1011400	Val	CAC
                   G      ACCA gcctgacctc
                     G - C
                     G - C
                     C   C
                     G   G
                     G - C
                     C - G
                     T - A          T A
                    T     C C A C C     A
        G A        G      | | | | |     G
      T     C T C G       G G T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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