The detailed information of tRNA gene sequence


Sequence ID>SRA1011402
Genome IDSRR020492.396297
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 73
End posion on genome 166
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aggggcctga
tRNA gene sequence 
GGAGAGGTGGCCGAGTCCGGTTGAAGGCGCTCCCCTGCTAAGGGAGTAAGGGCCCAAAAG
CTCTTCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ctattccgag
Secondary structure (Cloverleaf model)
>SRA1011402	Ser	GCT
                   a      GCCA ctattccgag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     A
  C         G C C G       G T G G G     C
  G           | | |                 T T
  G         A G G C
    T T G A        G     TAAGGGCCCAAAAGCTCTTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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