The detailed information of tRNA gene sequence


Sequence ID>SRA1011403
Genome IDSRR020492.396322
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 32
End posion on genome 120
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cttgaatttt
tRNA gene sequence 
GGAGGGGTGGCAGAGCGGCTTAATGCGGCGGTCTTGAAAACCGTTGACCCGTGAGGGTCC
GGGGGGTTCAAATCCCTCCCCCTCCGCGA
Downstream region at tRNA end position 
taataatgtt
Secondary structure (Cloverleaf model)
>SRA1011403	Ser	TGA
                   t      GCGA taataatgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | + | | |     A
    G       G A C G       G G G G G     C
    G         | | |                 T T
    C       A T G C
      T T A        G     TGACCCGTGAGGGTCCG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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