The detailed information of tRNA gene sequence


Sequence ID>SRA1011408
Genome IDSRR020492.397744
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 88
End posion on genome 14
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
ttttatttat
tRNA gene sequence 
GCGCCCGTAGCTCAGCTGGATAGAGTTCCGGACTTCGAATCCGTAGGTCGCAGGTTCGAA
TCCTGCCGGGCGTACtt
Downstream region at tRNA end position 
tttgtattag
Secondary structure (Cloverleaf model)
>SRA1011408	Arg	TCG
                   t      ACtt tttgtattag
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        T     AGGTC
                    C   T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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