The detailed information of tRNA gene sequence


Sequence ID>SRA1011416
Genome IDSRR020492.401577
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 196
End posion on genome 279
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
tatgaggaaa
tRNA gene sequence 
GGGCGAATGGCGGAACTGGTAGACGCGTTGGACTCAAAATCCAATGGTAGCAATGCTGTG
AGAGTTCGAGTCTCTCTTCGCCCTnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1011416	Leu	CAA
                   a      Tnnn nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T          T G
                    T     C T C T C     A
      C A A        G      | | | | |     G
    T       G G C G       G A G A G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGGTAGCAATGCTGT
                    T - A
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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