The detailed information of tRNA gene sequence


Sequence ID>SRA1011420
Genome IDSRR020492.402770
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 189
End posion on genome 116
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tcttcacgat
tRNA gene sequence 
GGCCCGTTCGTCTAGGGGTTAGGACGCCGGCTTCTCACGCCGGTAACAGGGGGTTCGATT
CCCCTACGGGCTACtt
Downstream region at tRNA end position 
atttattata
Secondary structure (Cloverleaf model)
>SRA1011420	Glu	CTC
                   t      ACtt atttattata
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T T
                    T     T C C C C     A
      G G A        C      + | | | |     G
    G       T C T G       G G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     TAACA
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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